Welcome to Stemformatics

This is a portal to a series of public experiments describing mouse and human stem cells and how they differentiate to become mature cells, tissues and organs.

You'll find data from leading stem cell laboratories in a format that is easy to search, easy to visualise and easy to export. Log in to run and save your own analyses.

Datasets

Choose from 141 public studies with 2181 human and 927 mouse samples. Filter by author, cell type or keyword. Click on the icons for easy access to interesting datasets.

Need Help? New Help System now in place!

New interactive tutorials that take you through many of Stemformatics' most important tools step-by-step, as well as new in-page help that gives specific help for certain pages.

Yugene Interactive Graph

Compare stem cell gene expressions across all the Stemformatics datasets. You can zoom in and even hover over the bars for more information.

Multiview

Compare up to four datasets. You will be asked to choose a gene and then up to four datasets. Please note that you have to be logged in.

Analyses

Upload, cluster, create heatmaps, analyse and share lists of genes, compare with public stem cell gene lists and pathways. With most of these analyses, you will need to register. Registration is free.

Annotate Gene List

Find out all the Kegg pathways that intersect a gene list. Find information on extracellular proteins in a public or your gene list, along with transcript information.

RECENT NEWS

Stemcells Australia Icon

Stemformatics is the collaboration platform of Stem Cells Australia.

ANALYSES

Analyse and visualise stem cell gene lists. Compare with public gene lists and Kegg pathways. Look for differential expression and co-expression and generate heatmaps to visualise expression patterns.

Check it out here...

WHO ARE WE?

Check out our ‘About us’ page to find out more, which can be seen here...